Latest version
Fastcov V1.03
- Windows
- Linux
- Mac OS X
- FreeBSD
- NetBSD
- OpenBSD
Examples: fastcov-examples.tar.gz
Installation
fastcov
is implemented in Golang programming language,
executable binary files for most popular operating system are freely available.
Just download compressed executable file of your operating system,
and uncompress it with tar -zxvf *.tar.gz
command or other tools.
And then:
-
For Linux-like systems
-
If you have root privilege simply copy it to
/usr/local/bin
:sudo cp fastcov /usr/local/bin/
-
Or add the current directory of the executable file to environment variable
PATH
:echo export PATH=\"$(pwd)\":\$PATH >> ~/.bashrc source ~/.bashrc
-
-
For windows, just copy
fastcov.exe
toC:\WINDOWS\system32
.
Release notes
- V1.03
- Add column
Avg.Degree
to.patterns.txt
file - Remove option
-d
- Update documents
- Add column
- V1.02
- Add file name suffix
.txt
to all result files - Add degree information to
.patterns.txt
file - Update documents
- Add file name suffix
- V1.01
- Fix a bug: sequence number of every cluster was repeatly counted in sequencing output.
- Add support for non-standard amino acid J.
- Shorten the option flags.
- Packaging example sequences and documents in release archive files.
- V1.0
- First version